STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL51365.1PFAM: protein of unknown function DUF364; KEGG: dma:DMR_26600 hypothetical protein. (252 aa)    
Predicted Functional Partners:
EFL51998.1
PFAM: periplasmic binding protein; KEGG: nha:Nham_0956 periplasmic binding protein.
 
    0.494
EFL51134.1
PFAM: periplasmic binding protein; KEGG: pca:Pcar_0153 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
    0.493
EFL51364.1
PFAM: conserved hypothetical protein; KEGG: dma:DMR_23680 hypothetical protein; Belongs to the LOG family.
       0.403
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.