STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL51279.1dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. (293 aa)    
Predicted Functional Partners:
EFL49561.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
 0.998
EFL51278.1
KEGG: dma:DMR_28600 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.996
EFL50589.1
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.966
EFL49567.1
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: dma:DMR_28260 putative glycosyltransferase; PFAM: sugar transferase.
 
  
 0.872
EFL50970.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: dma:DMR_38190 NAD-dependent epimerase/dehydratase family protein.
  
 0.850
EFL50844.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: hau:Haur_3899 NAD-dependent epimerase/dehydratase.
 
 0.797
EFL51716.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: dma:DMR_00110 putative UDP-glucuronate 5'-epimerase.
  
 0.790
EFL50808.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: cpb:Cphamn1_2145 NAD-dependent epimerase/dehydratase.
  
 0.790
EFL50837.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: dvl:Dvul_2586 NAD-dependent epimerase/dehydratase.
  
 0.790
EFL49562.1
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: dma:DMR_18000 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.748
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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