STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL51288.1HPr kinase; KEGG: dma:DMR_18060 hypothetical protein. (362 aa)    
Predicted Functional Partners:
EFL51287.1
PFAM: RimK domain protein ATP-grasp; KEGG: dma:DMR_18070 hypothetical protein.
 
     0.951
EFL51286.1
Phosphate uptake regulator, PhoU; PFAM: PhoU family protein; KEGG: dma:DMR_18080 hypothetical protein.
 
     0.938
EFL53073.1
KEGG: dma:DMR_20070 pyruvate-flavodoxin oxidoreductase; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
   
   0.910
EFL50046.1
Phosphate uptake regulator, PhoU; PFAM: PhoU family protein; KEGG: dma:DMR_33380 hypothetical protein.
 
     0.822
EFL50047.1
KEGG: dma:DMR_33390 hypothetical protein.
 
     0.795
EFL50048.1
KEGG: dma:DMR_33400 hypothetical protein.
 
     0.793
EFL51351.1
PFAM: protein of unknown function UPF0052 and CofD; KEGG: dma:DMR_20270 hypothetical protein.
 
  
 0.782
pgl
6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.
  
  
 0.720
EFL51285.1
KEGG: dma:DMR_18090 hypothetical protein.
       0.699
EFL52622.1
KEGG: chl:Chy400_0867 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; phosphocarrier, HPr family; PFAM: PEP-utilizing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphoryl transfer system HPr; PEP-utilising protein domain protein; PEP-utilising protein mobile region.
   
 
 0.620
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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