STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL51301.1KEGG: dma:DMR_22220 hypothetical protein. (176 aa)    
Predicted Functional Partners:
EFL51399.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; PAS fold-3 domain protein; response regulator receiver; KEGG: dma:DMR_26270 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver.
  
 
 0.925
EFL51510.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; SMART: MCP methyltransferase CheR-type; PAS domain containing protein; TIGRFAM: PAS sensor protein; KEGG: rfr:Rfer_2355 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; PAS fold domain protein.
  
 
 0.911
EFL51302.1
Putative chemotaxis phosphatase, CheZ; KEGG: dma:DMR_22230 hypothetical protein.
  
    0.898
EFL52921.1
KEGG: dma:DMR_03970 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS.
  
  
 0.830
EFL50050.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS fold-3 domain protein; KEGG: dvm:DvMF_2683 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS domain containing protein; PAC repeat-containing protein.
  
 
 0.822
EFL52922.1
Flagellar hook-associated 2 domain protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.808
EFL51300.1
PFAM: NIL domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dma:DMR_22210 iron-sulfur binding protein.
       0.759
EFL52789.1
TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: dma:DMR_20230 GGDEF domain protein; SMART: EAL domain protein; GGDEF domain containing protein.
  
 
 0.749
EFL50115.1
TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; CBS domain containing protein; GGDEF domain containing protein; KEGG: dma:DMR_13500 GGDEF domain protein; SMART: EAL domain protein; GGDEF domain containing protein.
  
 
 0.749
EFL50282.1
KEGG: dma:DMR_31500 flagellar hook-associated protein 1; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
  
  
 0.723
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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