STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL51303.1KEGG: dma:DMR_22240 putative cobalt ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (245 aa)    
Predicted Functional Partners:
EFL51304.1
Cobalt ABC transporter, inner membrane subunit CbiQ; KEGG: dma:DMR_22250 putative cobalt ABC transporter permease protein; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein.
 
 0.999
EFL51306.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: dma:DMR_22270 cobalamin biosynthesis protein CbiM.
 
 0.998
EFL51497.1
PFAM: cobalt transport protein; KEGG: dma:DMR_27660 hypothetical membrane protein.
  
 0.995
EFL51307.1
PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: dma:DMR_22280 hypothetical protein.
 
  
 0.954
EFL51496.1
KEGG: dma:DMR_27650 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
0.951
EFL51305.1
KEGG: dma:DMR_22260 hypothetical protein.
 
     0.951
EFL50777.1
TIGRFAM: precorrin-2 C20-methyltransferase; KEGG: dma:DMR_15490 cobalt-precorrin-2 C(20)-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Belongs to the precorrin methyltransferase family.
  
 
 0.840
EFL50586.1
PFAM: Nickel transport complex, NikM subunit, transmembrane; KEGG: dma:DMR_05050 hypothetical protein.
 
  
 0.830
EFL51476.1
TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; KEGG: dma:DMR_11880 putative cobalt-precorrin-6Y C(5)-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
 
 
 0.800
EFL50587.1
KEGG: dma:DMR_05060 cobalt-precorrin-8X methylmutase; PFAM: Precorrin-8X methylmutase CbiC/CobH.
 
 
 0.790
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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