STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL51338.1PFAM: aminoglycoside phosphotransferase; KEGG: dma:DMR_24250 hypothetical protein. (337 aa)    
Predicted Functional Partners:
EFL51337.1
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dma:DMR_24240 haloacid dehalogenase-like hydrolase family protein.
 
     0.951
EFL52493.1
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: dma:DMR_42700 putative acyl-CoA dehydrogenase.
  
 0.676
EFL52948.1
PFAM: polysaccharide biosynthesis protein; KEGG: dma:DMR_43620 hypothetical membrane protein.
 
     0.656
EFL49623.1
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: dma:DMR_11790 enoyl-CoA hydratase/isomerase family protein.
  
 0.654
EFL50043.1
KEGG: dma:DMR_14850 putative oxidoreductase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
  
 0.615
EFL49624.1
PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: dma:DMR_11780 CoA-binding domain protein.
   
 
 0.584
EFL51726.1
PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: dvm:DvMF_2043 hypothetical protein.
   
 
 0.577
EFL53191.1
PFAM: peptidase M29 aminopeptidase II; KEGG: dma:DMR_20750 putative M29 family peptidase.
  
     0.574
mtnA
Translation initiation factor, aIF-2BI family; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).
  
 
  0.554
EFL51946.1
KEGG: dma:DMR_25390 phosphoglucomutase; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase.
  
  
 0.547
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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