Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL51000.1 | EFL51001.1 | DesfrDRAFT_2159 | DesfrDRAFT_2160 | PFAM: protein of unknown function DUF540; KEGG: dma:DMR_15840 hypothetical protein. | KEGG: dma:DMR_15850 hypothetical protein. | 0.513 |
EFL51001.1 | EFL51000.1 | DesfrDRAFT_2160 | DesfrDRAFT_2159 | KEGG: dma:DMR_15850 hypothetical protein. | PFAM: protein of unknown function DUF540; KEGG: dma:DMR_15840 hypothetical protein. | 0.513 |
EFL51001.1 | EFL51002.1 | DesfrDRAFT_2160 | DesfrDRAFT_2161 | KEGG: dma:DMR_15850 hypothetical protein. | KEGG: dma:DMR_15860 hypothetical protein. | 0.484 |
EFL51001.1 | EFL51003.1 | DesfrDRAFT_2160 | DesfrDRAFT_2162 | KEGG: dma:DMR_15850 hypothetical protein. | KEGG: dma:DMR_15870 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; peptidase S1 and S6 chymotrypsin/Hap; SMART: Sel1 domain protein repeat-containing protein. | 0.484 |
EFL51002.1 | EFL51001.1 | DesfrDRAFT_2161 | DesfrDRAFT_2160 | KEGG: dma:DMR_15860 hypothetical protein. | KEGG: dma:DMR_15850 hypothetical protein. | 0.484 |
EFL51002.1 | EFL51003.1 | DesfrDRAFT_2161 | DesfrDRAFT_2162 | KEGG: dma:DMR_15860 hypothetical protein. | KEGG: dma:DMR_15870 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; peptidase S1 and S6 chymotrypsin/Hap; SMART: Sel1 domain protein repeat-containing protein. | 0.773 |
EFL51003.1 | EFL51001.1 | DesfrDRAFT_2162 | DesfrDRAFT_2160 | KEGG: dma:DMR_15870 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; peptidase S1 and S6 chymotrypsin/Hap; SMART: Sel1 domain protein repeat-containing protein. | KEGG: dma:DMR_15850 hypothetical protein. | 0.484 |
EFL51003.1 | EFL51002.1 | DesfrDRAFT_2162 | DesfrDRAFT_2161 | KEGG: dma:DMR_15870 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; peptidase S1 and S6 chymotrypsin/Hap; SMART: Sel1 domain protein repeat-containing protein. | KEGG: dma:DMR_15860 hypothetical protein. | 0.773 |