STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL50910.1PFAM: regulatory protein TetR; KEGG: scl:sce9227 TetR family transcriptional regulator. (209 aa)    
Predicted Functional Partners:
EFL50911.1
PFAM: Methyltransferase type 11; KEGG: sco:SCO5895 methyltransferase.
       0.773
EFL51970.1
PFAM: regulatory protein TetR; KEGG: dma:DMR_22950 TetR family transcriptional regulator.
  
     0.543
EFL52427.1
PFAM: regulatory protein TetR; KEGG: oan:Oant_0432 TetR family transcriptional regulator.
  
     0.508
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
  
    0.482
EFL52286.1
PFAM: regulatory protein TetR; KEGG: dma:DMR_28390 TetR family transcriptional regulator.
  
     0.479
EFL51679.1
Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
  
 
 0.463
EFL50196.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: dma:DMR_44540 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein.
    
 
 0.457
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
   
 
 0.452
EFL52188.1
PFAM: regulatory protein TetR; KEGG: rpe:RPE_3837 TetR family transcriptional regulator.
  
     0.451
EFL49681.1
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: bbe:BBR47_07490 probable transcriptional regulator.
  
     0.442
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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