STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL50829.1KEGG: dau:Daud_0022 oxidoreductase domain-containing protein. (321 aa)    
Predicted Functional Partners:
EFL50824.1
PFAM: Nucleotidyl transferase; CBS domain containing protein; KEGG: gka:GK3121 nucleoside-diphosphate-sugar pyrophosphorylase.
  
  
 0.880
EFL51697.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: dma:DMR_46220 hypothetical protein.
  
 
 0.868
EFL50605.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: dma:DMR_39510 hypothetical protein.
  
 
 0.868
EFL50823.1
TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; KEGG: gur:Gura_4087 carbonic anhydrase.
  
 
 0.864
EFL52282.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: dma:DMR_28550 hypothetical protein.
  
 
 0.810
EFL50825.1
KEGG: gur:Gura_4089 acylneuraminate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase.
  
  
 0.807
EFL49841.1
PFAM: Silent information regulator protein Sir2; KEGG: dma:DMR_13880 NAD-dependent deacetylase.
    
 0.802
EFL50826.1
TIGRFAM: N-acetyl sugar amidotransferase; KEGG: lpf:lpl0785 hypothetical protein.
  
    0.795
EFL50827.1
Glycosyl amidation-associated protein WbuZ; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
  
    0.795
hisH-2
Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
  
    0.792
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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