STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL50754.1Hypothetical protein; KEGG: dma:DMR_23340 spermine/spermidine synthase family protein. (186 aa)    
Predicted Functional Partners:
EFL51554.1
KEGG: dma:DMR_11520 hypothetical membrane protein.
    
  0.623
mqnB
Futalosine nucleosidase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).
     
 0.615
argD
KEGG: dma:DMR_45620 acetylornithine/succinyldiaminopimelate aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
     
 0.603
EFL51902.1
PFAM: aminotransferase class-III; KEGG: dma:DMR_18970 putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.597
EFL49425.1
PFAM: amine oxidase; KEGG: dma:DMR_02930 hypothetical protein.
    
  0.558
EFL51564.1
PFAM: amine oxidase; KEGG: dma:DMR_11600 hypothetical protein.
    
  0.544
EFL51252.1
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
     
 0.529
EFL50208.1
Inosine guanosine and xanthosine phosphorylase family; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
     
 0.529
EFL52378.1
PFAM: FAD dependent oxidoreductase; KEGG: bha:BH1848 hypothetical protein.
    
  0.515
EFL49673.1
PFAM: adenylate cyclase; KEGG: geo:Geob_2046 adenylate cyclase.
  
  
  0.515
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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