STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL50760.1PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain; KEGG: mea:Mex_1p1200 putative fused thiol:disulfide interchange protein precursor. (591 aa)    
Predicted Functional Partners:
msrA
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 
 0.987
EFL49749.1
PFAM: Redoxin domain protein; KEGG: dma:DMR_21140 thioredoxin-related domain protein.
  
 
 0.968
EFL50759.1
PFAM: DSBA oxidoreductase; KEGG: mea:Mex_1p2579 putative thioredoxin domain protein precursor.
  
 
 0.967
EFL52389.1
TIGRFAM: redox-active disulfide protein 2; KEGG: dma:DMR_37420 hypothetical protein.
  
 
 0.920
EFL51465.1
TIGRFAM: redox-active disulfide protein 2; KEGG: dma:DMR_20110 hypothetical protein.
  
 
 0.920
EFL52832.1
PFAM: DSBA oxidoreductase; KEGG: dma:DMR_06250 DsbA oxidoreductase family protein.
  
 
 0.912
EFL51983.1
PFAM: DSBA oxidoreductase; KEGG: dma:DMR_23080 DsbA oxidoreductase family protein.
  
 
 0.912
EFL50762.1
KEGG: mea:Mex_1p2582 integral membrane sensor signal transduction histidine kinase precursor; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
 
  
 0.890
EFL50761.1
Two component transcriptional regulator, winged helix family; KEGG: xau:Xaut_1075 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
 
   
 0.646
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
  
    0.519
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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