STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL50634.1PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dma:DMR_43940 iron-sulfur binding protein. (324 aa)    
Predicted Functional Partners:
EFL49790.1
PFAM: cytochrome c class I; KEGG: dma:DMR_35740 cytochrome c family protein.
 
  
 0.694
EFL50131.1
TIGRFAM: adenylylsulfate kinase; KEGG: dma:DMR_02810 sulfate adenylyltransferase; PFAM: adenylylsulfate kinase; ATP-sulfurylase.
    
  0.676
EFL50893.1
KEGG: dds:Ddes_0369 hypothetical protein.
 
  
 0.643
EFL53073.1
KEGG: dma:DMR_20070 pyruvate-flavodoxin oxidoreductase; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
 0.606
EFL52262.1
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dma:DMR_12840 HMC operon ORF 2 protein.
 
  
 0.566
EFL51683.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase alpha subunit domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dma:DMR_46040 nucleotide-disulphide oxidoreductase family protein.
  
 
 0.558
EFL51685.1
Hypothetical protein; KEGG: dma:DMR_46040 nucleotide-disulphide oxidoreductase family protein.
  
 
 0.558
hcp
Hybrid cluster protein; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.543
EFL50633.1
PFAM: aspartate/glutamate/uridylate kinase; KEGG: dma:DMR_43920 putative molybdenum storage protein.
       0.527
EFL52413.1
PFAM: molydopterin dinucleotide-binding region; KEGG: aha:AHA_3285 TtrA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
 0.502
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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