STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL50541.1KEGG: dma:DMR_08430 hypothetical protein. (656 aa)    
Predicted Functional Partners:
EFL50540.1
PFAM: glycosyl transferase family 2; KEGG: dma:DMR_08420 glycosyltransferase.
 
 
 0.977
EFL50543.1
KEGG: dma:DMR_08450 hypothetical protein.
 
     0.943
EFL50542.1
PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; KEGG: dma:DMR_08440 hypothetical protein.
       0.795
EFL49454.1
PFAM: glycosyl transferase family 2; glycoside hydrolase family 2 TIM barrel; KEGG: dma:DMR_13080 putative glycosyltransferase.
  
 
 0.795
EFL50035.1
Hyaluronan synthase; KEGG: dat:HRM2_46450 NodC; PFAM: glycosyl transferase family 2.
 
 
 0.753
EFL49265.1
KEGG: dma:DMR_38930 hypothetical protein.
    
 0.689
EFL52585.1
PFAM: glycosyl transferase family 2; KEGG: drt:Dret_1518 glycosyl transferase family 2.
  
 
 0.652
EFL52644.1
KEGG: dma:DMR_03220 hypothetical membrane protein.
  
 
 0.652
EFL51985.1
PFAM: glycosyl transferase family 2; KEGG: dma:DMR_23100 putative glycosyltransferase.
  
 
 0.652
EFL50972.1
PFAM: glycosyl transferase family 2; KEGG: dma:DMR_38170 putative glycosyltransferase.
  
 
 0.652
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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