STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL50481.1KEGG: dma:DMR_21310 hypothetical membrane protein. (132 aa)    
Predicted Functional Partners:
EFL50480.1
KEGG: dma:DMR_21320 HIT family protein.
       0.782
EFL52637.1
PFAM: protein of unknown function DUF721; KEGG: dma:DMR_42040 hypothetical protein.
  
     0.772
EFL49788.1
KEGG: dma:DMR_35760 hypothetical protein.
  
     0.772
EFL52487.1
PFAM: DNA polymerase III delta; KEGG: dma:DMR_44680 hypothetical protein.
  
     0.770
EFL51382.1
KEGG: dma:DMR_26780 hypothetical protein.
  
     0.770
EFL52235.1
KEGG: dma:DMR_33340 hypothetical protein.
  
     0.768
EFL53162.1
YHS domain protein; KEGG: dma:DMR_21990 hypothetical protein; PFAM: YHS domain protein; SMART: TRASH domain protein.
 
     0.765
EFL51821.1
KEGG: dma:DMR_18260 hypothetical protein; PFAM: GAF domain protein; SMART: GAF domain protein.
  
     0.761
EFL51006.1
KEGG: dma:DMR_32900 hypothetical protein.
  
     0.760
EFL49386.1
KEGG: dma:DMR_06580 hypothetical protein.
  
     0.760
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.