STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL50269.1KEGG: dma:DMR_38480 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; SMART: regulatory protein LuxR. (258 aa)    
Predicted Functional Partners:
EFL50196.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: dma:DMR_44540 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein.
  
 0.992
EFL50061.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; extracellular solute-binding protein family 3; PAS fold-4 domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: dma:DMR_33580 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver.
   
 0.990
EFL51923.1
Histidine kinase; KEGG: dma:DMR_17000 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver.
  
 0.988
EFL52384.1
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: dma:DMR_23510 two-component sensor histidine kinase; SMART: ATP-binding region ATPase domain protein.
 
 0.985
EFL51987.1
Response regulator receiver protein; KEGG: dma:DMR_23110 two-component hybrid sensor and regulator; PFAM: response regulator receiver; SMART: response regulator receiver.
  
 0.985
EFL51561.1
KEGG: dma:DMR_11570 response regulator receiver protein; PFAM: response regulator receiver; Hpt domain protein; SMART: response regulator receiver.
  
 0.985
EFL52136.1
TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: dma:DMR_18810 putative sensor histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein.
  
 0.983
EFL52151.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; KEGG: dsa:Desal_3301 multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver.
   
 0.979
EFL52799.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; response regulator receiver; Hpt domain protein; KEGG: dma:DMR_06270 two-component hybrid sensor and regulator; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver.
   
 0.977
EFL51937.1
Hpt sensor hybrid histidine kinase; KEGG: dma:DMR_25470 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein.
   
 0.977
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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