STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL49767.1PFAM: glycosyl transferase family 2; KEGG: dma:DMR_35440 putative glycosyltransferase. (238 aa)    
Predicted Functional Partners:
EFL49766.1
PFAM: class II aldolase/adducin family protein; KEGG: dma:DMR_35450 hypothetical protein.
     
 0.746
EFL49765.1
PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: dma:DMR_35460 aldehyde ferredoxin oxidoreductase family protein; SMART: Aldehyde ferredoxin oxidoreductase.
       0.741
EFL51048.1
TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: dvm:DvMF_3135 histidinol-phosphate phosphatase family protein.
  
 0.643
EFL49425.1
PFAM: amine oxidase; KEGG: dma:DMR_02930 hypothetical protein.
 
 
 0.642
EFL49567.1
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: dma:DMR_28260 putative glycosyltransferase; PFAM: sugar transferase.
  
  
 0.618
EFL49626.1
KEGG: nar:Saro_3231 hypothetical protein.
  
 
 0.564
EFL52512.1
KEGG: dma:DMR_42900 hypothetical membrane protein.
  
 
 0.553
EFL49805.1
KEGG: dma:DMR_13090 hypothetical membrane protein.
  
 
 0.553
EFL52522.1
PFAM: glycosyl transferase family 2; KEGG: dma:DMR_42800 glycosyltransferase.
 
  
 
0.547
EFL49279.1
PFAM: glycosyl transferase family 2; KEGG: dma:DMR_07560 putative glycosyltransferase.
 
  
 
0.543
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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