STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL49368.1MscS Mechanosensitive ion channel; KEGG: dma:DMR_26900 hypothetical membrane protein; PFAM: MscS Mechanosensitive ion channel; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM. (398 aa)    
Predicted Functional Partners:
EFL49322.1
PFAM: MscS Mechanosensitive ion channel; KEGG: dma:DMR_28070 mechanosensitive ion channel family protein.
 
  
 0.649
EFL51555.1
MscS Mechanosensitive ion channel; KEGG: dma:DMR_11530 hypothetical membrane protein; PFAM: MscS Mechanosensitive ion channel; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding.
 
  
 0.644
EFL51652.1
PFAM: inner-membrane translocator; KEGG: dma:DMR_45580 branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
    
  0.570
EFL49367.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
       0.473
EFL50135.1
PFAM: MscS Mechanosensitive ion channel; KEGG: noc:Noc_1914 MscS mechanosensitive ion channel.
  
     0.468
EFL49721.1
PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; TrkA-C domain protein; KEGG: dma:DMR_28020 putative transport protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
     
 0.454
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
    0.434
gcvPA
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.
   
    0.416
EFL50313.1
KEGG: dma:DMR_31790 glycine dehydrogenase [decarboxylating] subunit 2.
   
    0.416
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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