STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL49322.1PFAM: MscS Mechanosensitive ion channel; KEGG: dma:DMR_28070 mechanosensitive ion channel family protein. (782 aa)    
Predicted Functional Partners:
EFL49323.1
KEGG: dma:DMR_28060 bacterial extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 3; Ion transport 2 domain protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor.
 
     0.800
EFL49368.1
MscS Mechanosensitive ion channel; KEGG: dma:DMR_26900 hypothetical membrane protein; PFAM: MscS Mechanosensitive ion channel; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
 
  
 0.649
EFL49321.1
PFAM: Peptidase M23; KEGG: dma:DMR_28080 peptidase M23B family protein.
       0.525
EFL51555.1
MscS Mechanosensitive ion channel; KEGG: dma:DMR_11530 hypothetical membrane protein; PFAM: MscS Mechanosensitive ion channel; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding.
  
  
0.483
EFL49324.1
KEGG: dma:DMR_28050 efflux system protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.468
EFL49325.1
PFAM: acriflavin resistance protein; KEGG: dma:DMR_28040 efflux system protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.468
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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