STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL49291.1PFAM: glycosyl transferase family 2; KEGG: dvm:DvMF_1952 glycosyl transferase family 2. (537 aa)    
Predicted Functional Partners:
EFL49567.1
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: dma:DMR_28260 putative glycosyltransferase; PFAM: sugar transferase.
  
 
 0.914
EFL52920.1
KEGG: dma:DMR_03960 hypothetical protein.
 
  
 0.688
EFL49627.1
KEGG: dvm:DvMF_0206 hypothetical protein.
 
     0.643
EFL49724.1
PFAM: Methyltransferase type 12; KEGG: dma:DMR_27930 hypothetical protein.
 
    0.626
EFL50814.1
PFAM: polysaccharide biosynthesis protein CapD; KEGG: rru:Rru_A2741 polysaccharide biosynthesis protein CapD.
  
 
 0.625
EFL52200.1
PFAM: glycosyl transferase family 2; KEGG: dvm:DvMF_1837 glycosyl transferase family 2.
 
  
 0.597
EFL49562.1
TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: dma:DMR_18000 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.595
EFL51151.1
PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: dma:DMR_33470 hypothetical protein.
  
     0.585
EFL53187.1
KEGG: dma:DMR_20790 hypothetical protein.
  
     0.557
EFL52201.1
PFAM: glycosyl transferase family 2; KEGG: bid:Bind_0591 glycosyl transferase family protein.
 
  
 0.515
Your Current Organism:
Desulfovibrio fructosivorans
NCBI taxonomy Id: 596151
Other names: D. fructosivorans JJ, Desulfovibrio fructosivorans ATCC 49200, Desulfovibrio fructosivorans DSM 3604, Desulfovibrio fructosivorans JJ, Desulfovibrio fructosivorans str. JJ, Desulfovibrio fructosivorans strain JJ, Desulfovibrio fructosovorans JJ
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