STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIG55805.1ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain; PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family. (725 aa)    
Predicted Functional Partners:
EIG55804.1
PFAM: HlyD family secretion protein.
 0.999
EIG53486.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
 
 
0.971
EIG55170.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.
 
 
0.971
EIG52476.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
   
0.964
EIG55701.1
PFAM: Outer membrane efflux protein.
  
 
 0.942
EIG51912.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
  
 0.932
EIG52115.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
  
 0.932
EIG52586.1
Hypothetical protein.
  
 0.932
EIG52598.1
Hypothetical protein.
  
 0.932
EIG52714.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
  
 0.932
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.