STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIG51870.1PFAM: Bacterial protein of unknown function (DUF883). (98 aa)    
Predicted Functional Partners:
EIG51869.1
Putative membrane protein; PFAM: Protein of unknown function (DUF1469).
  
  
 0.967
EIG51868.1
Hypothetical protein.
       0.773
EIG53712.1
Hypothetical protein; PFAM: CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
  
 0.703
EIG51867.1
PAS domain S-box; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold.
       0.658
EIG52075.1
Putative redox protein, regulator of disulfide bond formation; PFAM: OsmC-like protein.
   
  
 0.539
EIG53685.1
LysM domain-containing protein; PFAM: LysM domain.
   
  
 0.537
EIG54386.1
Nicotinamidase-like amidase; PFAM: Isochorismatase family.
   
    0.509
EIG54653.1
Multimeric flavodoxin WrbA; PFAM: NADPH-dependent FMN reductase.
   
    0.465
EIG55136.1
Multimeric flavodoxin WrbA; PFAM: NADPH-dependent FMN reductase.
   
    0.465
EIG55278.1
PFAM: NADPH-dependent FMN reductase.
   
    0.465
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.