STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIG51913.1Drug resistance transporter, EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily. (527 aa)    
Predicted Functional Partners:
EIG51912.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
 
 
 0.988
EIG52714.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
 
 
 0.961
EIG52052.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
 
   
 0.785
EIG52115.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
 
 
 0.784
EIG51891.1
PFAM: Prephenate dehydratase; ACT domain; Chorismate mutase type II.
  
 
 0.706
EIG53215.1
PFAM: Pterin binding enzyme; B12 binding domain; Homocysteine S-methyltransferase.
   
 
  0.652
EIG54248.1
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.612
EIG51906.1
Sugar phosphate permease; PFAM: Major Facilitator Superfamily.
  
  
0.578
EIG51914.1
Hypothetical protein.
       0.497
EIG54382.1
Threonine dehydratase, medium form; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.
    
 0.468
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.