STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIG52375.1Hypothetical protein. (402 aa)    
Predicted Functional Partners:
EIG55790.1
Hypothetical protein.
  
 
  0.811
EIG55788.1
Bacterial regulatory protein, arsR family.
 
  
 0.804
EIG54866.1
PFAM: Protein of unknown function DUF115.
 
     0.785
EIG52661.1
Putative integral membrane protein; PFAM: Uncharacterised protein family (UPF0104).
 
 
 0.767
EIG53621.1
PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
 
 
 0.732
EIG52479.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
  
 0.698
EIG51954.1
Electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein domain.
  
     0.688
EIG52994.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2.
 
  
 0.688
EIG51957.1
PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain.
  
     0.682
EIG54292.1
PFAM: Glycosyl hydrolases family 18; Glycosyl transferase family 2; Polysaccharide deacetylase.
  
 
 0.670
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
Server load: low (18%) [HD]