STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIG52600.1Hypothetical protein. (554 aa)    
Predicted Functional Partners:
EIG52598.1
Hypothetical protein.
 
     0.917
EIG52599.1
Hypothetical protein.
 
     0.821
EIG52526.1
Hypothetical protein.
  
     0.773
EIG52522.1
Putative Fe-S oxidoreductase; PFAM: Radical SAM superfamily.
  
     0.746
EIG52525.1
Hypothetical protein.
  
     0.728
EIG52597.1
PFAM: Outer membrane efflux protein.
       0.727
EIG52595.1
ABC-type antimicrobial peptide transport system, permease component; PFAM: Predicted permease.
 
     0.708
EIG52596.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
       0.664
EIG55165.1
Hypothetical protein.
  
     0.638
EIG52586.1
Hypothetical protein.
  
     0.637
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.