STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIG52704.1Putative permease; PFAM: Sulfite exporter TauE/SafE. (384 aa)    
Predicted Functional Partners:
EIG52703.1
Hypothetical protein.
 
   
 0.924
EIG54320.1
Hypothetical protein.
 
   
 0.681
EIG52684.1
Hypothetical protein.
  
     0.653
EIG52698.1
Putative protein-tyrosine phosphatase; PFAM: Dual specificity phosphatase, catalytic domain.
 
   
 0.642
EIG54321.1
Putative permease; PFAM: Sulfite exporter TauE/SafE.
  
     0.574
EIG52699.1
PFAM: PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain.
 
   
 0.572
EIG52258.1
PFAM: Universal stress protein family.
  
   
 0.563
EIG54529.1
Hypothetical protein.
  
     0.540
EIG53436.1
Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase.
  
     0.528
EIG52701.1
PAS domain S-box; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold.
 
     0.519
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.