STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIG52941.1Hypothetical protein; PFAM: Domain of unknown function (DUF309). (136 aa)    
Predicted Functional Partners:
EIG52942.1
Lactoylglutathione lyase family protein.
       0.709
EIG52940.1
Hypothetical protein; PFAM: DinB family.
       0.532
EIG52939.1
Putative threonine efflux protein; PFAM: LysE type translocator.
       0.437
EIG52943.1
PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit.
  
    0.405
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.