STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIG53335.1Thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase. (301 aa)    
Predicted Functional Partners:
EIG53529.1
PFAM: Thioredoxin; Belongs to the thioredoxin family.
 0.978
EIG53041.1
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
 
 0.962
EIG52260.1
PFAM: Thioredoxin.
  
 0.946
EIG52748.1
Peroxiredoxin; PFAM: AhpC/TSA family.
  
 
 0.946
EIG54481.1
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
 
 0.914
EIG53216.1
Thiol-disulfide isomerase-like thioredoxin; PFAM: AhpC/TSA family.
   
 0.879
EIG55534.1
Thioredoxin domain-containing protein; PFAM: Thioredoxin; Belongs to the thioredoxin family.
   
 0.879
EIG53392.1
Small redox-active disulfide protein 2.
   
 0.858
EIG55535.1
Hypothetical protein; TIGRFAM: small redox-active disulfide protein 2.
   
 0.858
EIG52176.1
NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; GXGXG motif.
  
 
0.843
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
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