STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIG53357.1Hypothetical protein; PFAM: Uncharacterised ACR, YkgG family COG1556. (469 aa)    
Predicted Functional Partners:
EIG53356.1
Fe-S oxidoreductase; PFAM: Cysteine-rich domain.
 0.998
EIG53358.1
Hypothetical protein; PFAM: Uncharacterised ACR, YkgG family COG1556.
 
 
 0.996
EIG53444.1
Hypothetical protein; PFAM: Uncharacterised ACR, YkgG family COG1556.
 
 
 0.989
EIG53448.1
Fe-S oxidoreductase; PFAM: Cysteine-rich domain.
 
 0.960
EIG53450.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
 0.908
EIG52058.1
Fe-S oxidoreductase; PFAM: Cysteine-rich domain.
 0.892
EIG54565.1
Fe-S oxidoreductase; PFAM: Cysteine-rich domain.
 
 0.872
EIG51944.1
NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Cysteine-rich domain.
  
 0.852
EIG52338.1
NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Cysteine-rich domain.
  
 0.852
EIG55653.1
NAD-dependent aldehyde dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family. In the N-terminal section; belongs to the proline dehydrogenase family.
  
 
 0.848
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.