STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIG53854.1PFAM: Polysulphide reductase, NrfD. (414 aa)    
Predicted Functional Partners:
EIG53856.1
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.993
EIG54248.1
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.993
EIG53857.1
PFAM: Class III cytochrome C family.
 
 
 0.992
EIG53855.1
Fe-S-cluster-containing hydrogenase subunit.
 
 0.990
EIG52810.1
Fe-S-cluster-containing hydrogenase subunit.
 
 0.943
EIG54245.1
Hypothetical protein.
 
 
 0.943
EIG54828.1
Fe-S-cluster-containing hydrogenase subunit.
 
 0.940
EIG52708.1
Anaerobic dehydrogenase, typically selenocysteine-containing; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.935
EIG53286.1
Fe-S-cluster-containing hydrogenase subunit.
 0.935
EIG55689.1
Fe-S-cluster-containing hydrogenase subunit.
 
 0.931
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.