STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIG54040.1Hypothetical protein. (233 aa)    
Predicted Functional Partners:
EIG54041.1
Hypothetical protein.
       0.785
EIG54042.1
Hypothetical protein.
       0.773
EIG54043.1
DnaK suppressor protein; PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family.
       0.773
EIG54044.1
Hypothetical protein.
       0.773
EIG54045.1
Hypothetical protein.
       0.773
EIG54046.1
Hypothetical protein.
       0.773
EIG54047.1
Putative soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; PFAM: Transglycosylase SLT domain.
       0.773
EIG54048.1
Hypothetical protein.
       0.773
EIG54049.1
Hypothetical protein.
       0.773
EIG54050.1
Hypothetical protein.
       0.757
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.