STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIG54437.1PFAM: Aldo/keto reductase family. (407 aa)    
Predicted Functional Partners:
EIG52347.1
PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus.
  
   0.923
EIG52348.1
PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.
  
   0.923
EIG52805.1
Polyferredoxin, heterodixulfide reductase subunit A; PFAM: Methyl-viologen-reducing hydrogenase, delta subunit.
  
   0.829
EIG52344.1
Hypothetical protein; PFAM: Rubrerythrin.
  
 
   0.789
EIG54439.1
Hypothetical protein; PFAM: Domain of unknown function (DUF362).
 
     0.730
EIG54438.1
PFAM: 4Fe-4S binding domain.
 
    0.707
EIG52176.1
NADPH-dependent glutamate synthase beta chain-like oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; GXGXG motif.
 
 
  0.697
EIG53450.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
  0.694
EIG53788.1
Rhodanese-related sulfurtransferase; PFAM: Rubrerythrin; Rhodanese-like domain.
   
   0.674
EIG53205.1
2-oxoacid:acceptor oxidoreductase, alpha subunit; PFAM: domain; Transketolase, C-terminal domain; Pyruvate ferredoxin/flavodoxin oxidoreductase.
   
 
  0.612
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.