STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIG54509.1Flp pilus assembly protein, ATPase CpaF; PFAM: Type II/IV secretion system protein. (456 aa)    
Predicted Functional Partners:
EIG54508.1
Flp pilus assembly protein TadB; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.988
EIG54507.1
Flp pilus assembly protein TadC; PFAM: Bacterial type II secretion system protein F domain.
 
  
 0.979
EIG54512.1
Flp pilus assembly protein, secretin CpaC; PFAM: Putative phospholipid-binding domain; Bacterial type II and III secretion system protein; Belongs to the bacterial secretin family.
  
 0.962
EIG54510.1
Flp pilus assembly protein, ATPase CpaE; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
  
 0.961
EIG54513.1
PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB.
 
  
 0.954
EIG55112.1
Flp pilus assembly protein, protease CpaA; PFAM: Type IV leader peptidase family.
 
   
 0.827
EIG55556.1
PFAM: Flp/Fap pilin component.
 
  
 0.796
EIG52100.1
Type IV secretory pathway, VirB10 component; PFAM: Bacterial conjugation TrbI-like protein.
 
  
 0.780
EIG53101.1
PAS domain S-box; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
  
 0.599
EIG55558.1
PAS domain S-box; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
  
 0.599
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.