Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EIG54837.1PFAM: Methylamine utilisation protein MauE. (151 aa)    
Predicted Functional Partners:
EIG54836.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
 
   
 0.945
EIG53786.1
PFAM: Methylamine utilisation protein MauE.
  
     0.760
EIG54205.1
EpsI family protein; PFAM: Protein of unknown function (DUF3485); TIGRFAM: EpsI family protein.
  
 
   0.736
EIG54206.1
PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: exosortase/archaeosortase family protein; exosortase.
  
 
   0.711
EIG54835.1
Hypothetical protein; Manually curated; partial gene.
       0.664
EIG54834.1
PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein.
 
   
 0.622
EIG51880.1
Mn2+/Fe2_ transporter, NRAMP family; PFAM: Natural resistance-associated macrophage protein.
   
 
 0.553
EIG52716.1
Mn2+/Fe2_ transporter, NRAMP family; PFAM: Natural resistance-associated macrophage protein.
   
 
 0.553
EIG53046.1
Magnesium-translocating P-type ATPase; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase.
    
 0.547
EIG55702.1
PFAM: 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I.
  
  
 0.543
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
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