STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIG55032.1Periplasmic component of amino acid ABC-type transporter/signal transduction system; PFAM: Bacterial extracellular solute-binding proteins, family 3. (250 aa)    
Predicted Functional Partners:
EIG55033.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 0.997
EIG55034.1
ABC-type polar amino acid transport system, ATPase component; PFAM: ABC transporter.
 
 0.996
EIG55035.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 0.996
EIG51915.1
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport system inner membrane component.
 0.993
EIG54876.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 0.992
EIG51916.1
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport system inner membrane component.
 0.988
EIG52851.1
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport system inner membrane component.
 0.983
EIG51918.1
ABC-type polar amino acid transport system, ATPase component; PFAM: ABC transporter.
 
 0.944
EIG54875.1
ABC-type polar amino acid transport system, ATPase component; PFAM: ABC transporter.
 
 0.944
EIG53101.1
PAS domain S-box; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
   
 0.830
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.