STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIG55478.1ABC-type Fe3+ transport system, periplasmic component. (412 aa)    
Predicted Functional Partners:
EIG55477.1
ABC-type antimicrobial peptide transport system, ATPase component.
 
 
  0.969
EIG55476.1
Ni2+-binding GTPase, urease/hydrogenase maturation protein; PFAM: CobW/HypB/UreG, nucleotide-binding domain.
 
     0.949
EIG53022.1
Putative 2-aminoethylphosphonate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 
 0.946
EIG53023.1
ABC-type spermidine/putrescine transport system, ATPase component; PFAM: ABC transporter; TOBE domain.
  
 
 0.840
EIG53936.1
Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
   0.749
EIG52170.1
Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.710
EIG52963.1
Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.710
EIG53663.1
Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.710
EIG54568.1
Flagellar motor protein; PFAM: OmpA family.
    
   0.701
EIG54839.1
Flagellar motor protein; PFAM: OmpA family.
    
   0.701
Your Current Organism:
Desulfovibrio sp. U5L
NCBI taxonomy Id: 596152
Other names: D. sp. U5L
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.