Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EIG55695.1 | EIG55696.1 | DesU5LDRAFT_4102 | DesU5LDRAFT_4103 | PFAM: Transposase DDE domain; manually curated. | Hypothetical protein. | 0.605 |
EIG55695.1 | EIG55697.1 | DesU5LDRAFT_4102 | DesU5LDRAFT_4104 | PFAM: Transposase DDE domain; manually curated. | Uncharacterized protein (competence- and mitomycin-induced); PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain; Belongs to the CinA family. | 0.410 |
EIG55696.1 | EIG55695.1 | DesU5LDRAFT_4103 | DesU5LDRAFT_4102 | Hypothetical protein. | PFAM: Transposase DDE domain; manually curated. | 0.605 |
EIG55696.1 | EIG55697.1 | DesU5LDRAFT_4103 | DesU5LDRAFT_4104 | Hypothetical protein. | Uncharacterized protein (competence- and mitomycin-induced); PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain; Belongs to the CinA family. | 0.508 |
EIG55697.1 | EIG55695.1 | DesU5LDRAFT_4104 | DesU5LDRAFT_4102 | Uncharacterized protein (competence- and mitomycin-induced); PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain; Belongs to the CinA family. | PFAM: Transposase DDE domain; manually curated. | 0.410 |
EIG55697.1 | EIG55696.1 | DesU5LDRAFT_4104 | DesU5LDRAFT_4103 | Uncharacterized protein (competence- and mitomycin-induced); PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain; Belongs to the CinA family. | Hypothetical protein. | 0.508 |