Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB82453.1KEGG: reh:H16_A2140 extra-cytoplasmic solute receptor. (340 aa)    
Predicted Functional Partners:
AEB86063.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: ajs:Ajs_3411 hypothetical protein.
 
  
 0.716
AEB82455.1
Methylcrotonoyl-CoA carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Biotin/lipoyl attachment; KEGG: xtr:100489724 acetyl-/propionyl-coenzyme A carboxylase alpha chain-like; SMART: Biotin carboxylase, C-terminal.
       0.674
AEB82454.1
PFAM: Protein of unknown function DUF1446; KEGG: reh:H16_A2141 hypothetical protein.
       0.664
AEB82456.1
KEGG: reh:H16_A2143 acyl-CoA dehydrogenase, long-chain specific; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal.
       0.634
AEB86064.1
KEGG: dia:Dtpsy_2746 protein of unknown function DUF1468.
 
  
 0.618
AEB84486.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: ajs:Ajs_1644 hypothetical protein.
 
  
 0.524
AEB82457.1
KEGG: reh:H16_A2144 propionyl-CoA carboxylase beta chain; PFAM: Carboxyl transferase.
       0.414
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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