close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82500.1KEGG: ajs:Ajs_0032 methyltransferase type 12. (259 aa)    
Predicted Functional Partners:
AEB82499.1
TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: aav:Aave_0056 chromosome segregation DNA-binding protein; SMART: ParB-like nuclease; Belongs to the ParB family.
       0.775
AEB85192.1
KEGG: ajs:Ajs_2412 hypothetical protein.
  
     0.768
AEB86550.1
PFAM: Metal-dependent hydrolase HDOD; KEGG: ajs:Ajs_3839 putative signal transduction protein.
  
     0.751
AEB82501.1
Peptidoglycan-binding domain 1 protein; PFAM: Peptidoglycan binding-like; KEGG: dia:Dtpsy_0052 peptidoglycan-binding domain 1 protein.
 
     0.724
AEB82498.1
PFAM: Protein of unknown function DUF1234; KEGG: ajs:Ajs_0030 hypothetical protein.
       0.716
AEB86509.1
PFAM: Flagellar biosynthesis protein, FliO; KEGG: dia:Dtpsy_3072 flagellar biosynthesis protein FliO.
  
     0.701
AEB86530.1
Chemotaxis phosphatase, CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
  
     0.668
AEB86520.1
PFAM: Flagellar export chaperone, FliT; KEGG: dia:Dtpsy_3083 flagellar protein FliT.
  
     0.658
AEB86533.1
Flagellar biosynthetic protein FlhF; TIGRFAM: Signal-recognition particle (SRP)-type GTPase; PFAM: Signal recognition particle, SRP54 subunit, GTPase; KEGG: ajs:Ajs_3821 GTP-binding signal recognition particle; SMART: ATPase, AAA+ type, core.
  
     0.629
AEB84676.1
ErfK/YbiS/YcfS/YnhG family protein; PFAM: YkuD domain; KEGG: aav:Aave_2318 ErfK/YbiS/YcfS/YnhG.
  
     0.617
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.