STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82538.1Metallophosphoesterase; PFAM: Metallo-dependent phosphatase; KEGG: ajs:Ajs_0075 metallophosphoesterase. (282 aa)    
Predicted Functional Partners:
AEB82539.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: ajs:Ajs_0076 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.703
AEB86893.1
PFAM: Protein of unknown function DUF1289; KEGG: dia:Dtpsy_3379 protein of unknown function DUF1289.
  
     0.694
AEB82537.1
PFAM: UspA; KEGG: ajs:Ajs_0074 UspA domain-containing protein.
       0.649
AEB83358.1
PFAM: Outer membrane lipoprotein LolB; KEGG: dia:Dtpsy_0826 putative lipoprotein.
  
     0.592
AEB86010.1
KEGG: dia:Dtpsy_2705 hypothetical protein.
  
     0.578
AEB83171.1
KEGG: dia:Dtpsy_0653 general secretion pathway protein H; manually curated; TIGRFAM: Bacterial general secretion pathway protein H; Prepilin-type cleavage/methylation, N-terminal.
  
     0.527
AEB86281.1
KEGG: ajs:Ajs_3529 hypothetical protein.
 
     0.521
AEB82797.1
KEGG: dia:Dtpsy_0288 hypothetical protein.
  
     0.520
AEB82540.1
KEGG: ajs:Ajs_0077 hypothetical protein.
       0.484
AEB83169.1
KEGG: ajs:Ajs_0672 hypothetical protein.
  
     0.480
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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