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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82549.1PFAM: Cupin 2, conserved barrel; KEGG: aav:Aave_0177 cupin 2 domain-containing protein. (127 aa)    
Predicted Functional Partners:
AEB82550.1
KEGG: xtr:100487983 UPF0065 protein in clcB-clcD intergenic region-like.
 
     0.823
AEB82548.1
KEGG: aav:Aave_0176 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain.
 
    0.802
AEB82547.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: aav:Aave_0175 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
  
 0.735
AEB82546.1
KEGG: ajs:Ajs_0083 methionine synthase (B12-dependent); PFAM: Homocysteine S-methyltransferase.
       0.711
AEB83144.1
KEGG: ctt:CtCNB1_3962 hypothetical protein.
 
   
 0.697
AEB86611.1
PFAM: Monooxygenase, FAD-binding; KEGG: ajs:Ajs_3884 FAD dependent oxidoreductase.
  
   
 0.693
AEB86924.1
PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: dia:Dtpsy_3406 hypothetical protein.
  
     0.681
AEB83826.1
KEGG: dia:Dtpsy_1105 polysaccharide deacetylase; manually curated; PFAM: Polysaccharide deacetylase.
 
     0.625
AEB83798.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0788 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
  
 0.614
AEB85882.1
Palmitoyl-CoA hydrolase; KEGG: axy:AXYL_03759 BAAT/acyl-CoA thioester hydrolase family protein 1; PFAM: BAAT/Acyl-CoA thioester hydrolase C-terminal; Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase.
 
     0.572
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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