STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82556.1PFAM: Haemerythrin/HHE cation-binding motif; KEGG: dia:Dtpsy_0108 hemerythrin HHE cation binding domain-containing protein. (142 aa)    
Predicted Functional Partners:
AEB82557.1
KEGG: dia:Dtpsy_0109 nitric oxide reductase large subunit.
 
  
 0.728
AEB82558.1
Sigma54 specific transcriptional regulator, Fis family; KEGG: dia:Dtpsy_0110 anaerobic nitric oxide reductase transcription regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core.
 
   
 0.553
AEB83180.1
PFAM: Porin, Gram-negative type; KEGG: dia:Dtpsy_0662 porin gram-negative type.
 
     0.535
AEB82555.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAS fold; PAS fold-4; KEGG: ajs:Ajs_0088 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: Diguanylate phosphodiesterase, EAL domain; Diguanylate cyclase, predicted; PAC motif; PAS.
 
     0.514
AEB84961.1
PFAM: Metal-dependent phosphohydrolase, HD subdomain; KEGG: ajs:Ajs_1963 metal dependent phosphohydrolase.
  
     0.510
AEB84650.1
PFAM: Domain of unknown function DUF306, Meta/HslJ; KEGG: dac:Daci_2483 hypothetical protein.
  
     0.478
AEB84054.1
Putative solute symporter protein; TIGRFAM: Sodium symporter small subunit, predicted; KEGG: ajs:Ajs_2878 hypothetical protein.
  
     0.433
AEB84602.1
KEGG: dia:Dtpsy_2274 hypothetical protein.
  
     0.419
AEB83639.1
KEGG: dia:Dtpsy_2653 hypothetical protein.
  
     0.416
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.