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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82586.1KEGG: dia:Dtpsy_0133 hypothetical protein. (331 aa)    
Predicted Functional Partners:
AEB86063.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: ajs:Ajs_3411 hypothetical protein.
 
  
 0.747
AEB86064.1
KEGG: dia:Dtpsy_2746 protein of unknown function DUF1468.
 
  
 0.722
AEB82585.1
Citryl-CoA lyase; KEGG: dia:Dtpsy_0131 HpcH/HpaI aldolase; PFAM: Aldehyde-lyase domain; Belongs to the HpcH/HpaI aldolase family.
       0.682
AEB84486.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: ajs:Ajs_1644 hypothetical protein.
 
  
 0.583
AEB82587.1
MmgE/PrpD family protein; PFAM: MmgE/PrpD; KEGG: dia:Dtpsy_0134 MmgE/PrpD family protein.
       0.578
AEB82584.1
KEGG: ajs:Ajs_0113 major facilitator superfamily transporter; manually curated; PFAM: Major facilitator superfamily MFS-1.
       0.564
AEB84363.1
TIGRFAM: Phosphonate-binding periplasmic protein; KEGG: mms:mma_3041 phosphonate ABC-type transport system substrate-binding protein.
   
    0.489
AEB82588.1
Formyl-CoA transferase; KEGG: ajs:Ajs_0117 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III; Belongs to the CoA-transferase III family.
  
    0.480
AEB82589.1
KEGG: dac:Daci_0198 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal.
       0.459
AEB82590.1
KEGG: dia:Dtpsy_0137 hypothetical protein.
 
     0.453
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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