Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB82642.1KEGG: ajs:Ajs_0153 ferredoxin--NADP(+) reductase; PFAM: Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding. (257 aa)    
Predicted Functional Partners:
AEB82643.1
PFAM: Extracellular ligand-binding receptor; KEGG: dia:Dtpsy_0172 extracellular ligand-binding receptor.
       0.516
AEB82644.1
ABC-type transporter, integral membrane subunit; PFAM: ABC transporter permease; KEGG: ajs:Ajs_0155 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
       0.494
AEB82645.1
Monosaccharide-transporting ATPase; PFAM: ABC transporter-like; KEGG: vei:Veis_0860 ABC transporter related; SMART: ATPase, AAA+ type, core.
     
 0.486
AEB82890.1
PFAM: Nitroreductase-like; KEGG: dia:Dtpsy_0434 nitroreductase.
 
  
 0.454
AEB83621.1
Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
  
  
 0.424
AEB85459.1
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.423
AEB83225.1
KEGG: ajs:Ajs_0741 glutamate synthase (NADH) large subunit; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
      
 0.421
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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