Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEB82646.1Peptidase C1A papain; KEGG: kpe:KPK_1160 peptidoglycan binding domain/papain family cysteine protease; PFAM: Peptidase C1A, papain C-terminal; SMART: Peptidase C1A, papain C-terminal. (966 aa)    
Predicted Functional Partners:
AEB84408.1
TIGRFAM: Tape measure domain; KEGG: dia:Dtpsy_3197 phage tape measure protein.
  
  
 0.765
AEB86304.1
GPW/gp25 family protein; PFAM: GPW/gp25; KEGG: cag:Cagg_1491 gpW/GP25 family protein.
 
  
 0.756
AEB84394.1
KEGG: mms:mma_2706 hypothetical protein.
  
  
 0.619
AEB86307.1
KEGG: nde:NIDE2231 hypothetical protein.
 
  
 0.599
AEB86318.1
KEGG: nha:Nham_0832 phage tail sheath protein.
 
  
 0.585
AEB86789.1
KEGG: pna:Pnap_1828 hypothetical protein.
  
     0.573
AEB85165.1
TraF-like protein; TIGRFAM: Type IV conjugative transfer system protein TraF; KEGG: ajs:Ajs_1526 hypothetical protein.
  
 
 0.532
AEB85696.1
TraF-like protein; KEGG: ajs:Ajs_1526 hypothetical protein; TIGRFAM: Type IV conjugative transfer system protein TraF; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant.
  
 
 0.530
AEB86313.1
AAA ATPase central domain protein; KEGG: nde:NIDE2224 putative ATPase; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core.
 
 
 0.525
AEB82549.1
PFAM: Cupin 2, conserved barrel; KEGG: aav:Aave_0177 cupin 2 domain-containing protein.
  
     0.522
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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