Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB82654.13-hydroxyisobutyrate dehydrogenase; KEGG: esa:ESA_04058 hypothetical protein; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding. (296 aa)    
Predicted Functional Partners:
AEB84095.1
TIGRFAM: Succinic semialdehyde dehydrogenase; KEGG: dac:Daci_2346 succinic semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; Belongs to the aldehyde dehydrogenase family.
  
 
 0.917
AEB86102.1
PFAM: Aldehyde dehydrogenase domain; KEGG: dia:Dtpsy_0944 aldehyde dehydrogenase.
  
 
 0.917
AEB82655.1
PFAM: Alpha/beta hydrolase fold-1; KEGG: axy:AXYL_03189 alpha/beta hydrolase fold family protein 10.
     
 0.774
AEB82656.1
KEGG: axy:AXYL_03188 hypothetical protein.
     
 0.774
AEB82657.1
KEGG: vap:Vapar_4786 membrane protein AbrB duplication; TIGRFAM: AbrB duplication, membrane protein; PFAM: Putative ammonia monooxygenase.
       0.553
AEB84516.1
KEGG: ajs:Ajs_2556 3-hydroxyisobutyryl-CoA hydrolase; PFAM: Crotonase, core.
  
 0.550
AEB82653.1
Hypothetical protein.
       0.468
AEB83514.1
KEGG: dia:Dtpsy_0989 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
  
    0.401
AEB86430.1
KEGG: mrb:Mrub_0164 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily.
  
    0.401
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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