STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82686.1PFAM: MaoC-like dehydratase; KEGG: dac:Daci_0013 dehydratase. (153 aa)    
Predicted Functional Partners:
AEB84246.1
PFAM: MaoC-like dehydratase; KEGG: bur:Bcep18194_C7491 MaoC-like dehydratase.
  
     0.763
AEB83890.1
PFAM: MaoC-like dehydratase; KEGG: reu:Reut_A1834 MaoC-like dehydratase.
  
     0.759
AEB84247.1
KEGG: bpt:Bpet1156 hypothetical protein.
  
     0.754
AEB82934.1
KEGG: ctt:CtCNB1_2196 hypothetical protein.
  
     0.723
AEB83863.1
PFAM: MaoC-like dehydratase; KEGG: bur:Bcep18194_C7289 MaoC-like dehydratase.
  
     0.715
AEB82687.1
KEGG: dac:Daci_0012 hypothetical protein.
       0.714
AEB82903.1
PFAM: MaoC-like dehydratase; KEGG: cti:RALTA_B1743 hypothetical protein.
  
     0.586
AEB84046.1
Catalase; KEGG: gpb:HDN1F_12050 catalase; PFAM: Catalase-related subgroup; Catalase-related immune responsive; Belongs to the catalase family.
   
 0.586
AEB82901.1
KEGG: cti:RALTA_B1741 hypothetical protein.
  
     0.579
AEB82523.1
KEGG: ajs:Ajs_0061 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1.
 
 0.534
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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