Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEB82687.1KEGG: dac:Daci_0012 hypothetical protein. (323 aa)    
Predicted Functional Partners:
AEB86063.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: ajs:Ajs_3411 hypothetical protein.
 
  
 0.745
AEB82686.1
PFAM: MaoC-like dehydratase; KEGG: dac:Daci_0013 dehydratase.
       0.714
AEB84486.1
PFAM: Protein of unknown function DUF112, transmembrane; KEGG: ajs:Ajs_1644 hypothetical protein.
 
  
 0.587
AEB86064.1
KEGG: dia:Dtpsy_2746 protein of unknown function DUF1468.
 
  
 0.529
AEB82688.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: dac:Daci_0011 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.522
AEB82685.1
PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: oca:OCAR_5014 activator of HSP90 ATPase 1 family protein.
  
    0.514
AEB82683.1
MOSC domain containing protein; PFAM: Molybdenum cofactor sulfurase, C-terminal; KEGG: dia:Dtpsy_0210 MOSC domain containing protein.
       0.466
AEB82684.1
PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: dia:Dtpsy_0211 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen.
       0.466
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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