STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82704.1PFAM: Ferredoxin; KEGG: ajs:Ajs_0217 ferredoxin. (113 aa)    
Predicted Functional Partners:
AEB82703.1
KEGG: azo:azo1850 phenol 2-monooxygenase; PFAM: Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; Ferredoxin.
 
     0.936
AEB82705.1
TIGRFAM: Catechol 2,3 dioxygenase; KEGG: ajs:Ajs_0218 catechol 2,3-dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase.
 
     0.932
AEB82702.1
PFAM: Phenol hydroxylase,conserved region; KEGG: rpf:Rpic12D_3551 phenol hydroxylase conserved region.
 
   
 0.901
AEB82698.1
PFAM: Phenol hydroxylase subunit; KEGG: avn:Avin_30760 multi-component phenol hydoxylase, assembly subunit; LapK.
 
   
 0.877
AEB82706.1
PFAM: Domain of unknown function DUF336; KEGG: ajs:Ajs_0219 hypothetical protein.
 
     0.871
AEB82701.1
KEGG: azo:azo2441 phenol hydroxylase subunit P3; PFAM: Methane/phenol/toluene hydroxylase; YHS.
 
   
 0.869
AEB82700.1
PFAM: Monooxygenase component MmoB/DmpM; KEGG: azo:azo2442 phenol hydrolase subunit P2.
 
   
 0.863
AEB82699.1
KEGG: azo:azo2443 phenol hydroxylase subunit P1; PFAM: Methane/phenol/toluene hydroxylase.
 
   
 0.860
AEB82697.1
KEGG: lch:Lcho_3364 putative sigma54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Activator of aromatic catabolism; Helix-turn-helix, Fis-type; 4-vinyl reductase, 4VR; SMART: ATPase, AAA+ type, core.
 
   
 0.723
AEB82709.1
KEGG: ctt:CtCNB1_3150 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1.
  
     0.714
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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