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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82730.1KEGG: rme:Rmet_4432 IclR family transcriptional regulator family; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal. (242 aa)    
Predicted Functional Partners:
AEB85526.1
Urea amidolyase related protein; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; TIGRFAM: Allophanate hydrolase subunit 2; Conserved hypothetical protein CHP00370; KEGG: reu:Reut_A2450 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1.
  
    0.787
AEB86834.1
KEGG: ajs:Ajs_3971 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal.
  
     0.744
AEB82942.1
KEGG: aav:Aave_4262 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal.
  
     0.729
AEB82473.1
KEGG: bpt:Bpet3285 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal.
  
     0.726
AEB85885.1
Transcriptional regulator, IclR family; KEGG: rso:RSc3411 transcription regulator protein; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal.
  
     0.723
AEB86950.1
KEGG: bxe:Bxe_C0866 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal.
  
     0.709
AEB86247.1
TIGRFAM: Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; KEGG: dia:Dtpsy_2874 transcriptional regulator, IclR family; SMART: Transcription regulator IclR, N-terminal.
  
     0.673
AEB82583.1
KEGG: reh:H16_A2154 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal.
  
     0.667
AEB85461.1
KEGG: dia:Dtpsy_1946 transcriptional regulator, IclR family; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal.
  
     0.664
AEB82466.1
KEGG: dia:Dtpsy_0022 transcriptional regulator, IclR family; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal.
  
     0.626
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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