STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEB82741.1KEGG: dia:Dtpsy_0225 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR. (257 aa)    
Predicted Functional Partners:
AEB82740.1
KEGG: ajs:Ajs_0230 acyl-CoA dehydrogenase domain-containing protein; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal.
 
  0.870
AEB82742.1
PFAM: Aminoglycoside phosphotransferase; KEGG: ajs:Ajs_0232 aminoglycoside phosphotransferase.
 
 
 0.830
AEB83388.1
KEGG: vap:Vapar_5678 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR.
  
     0.726
AEB86223.1
KEGG: app:CAP2UW1_1324 oxidoreductase FAD-binding domain protein; PFAM: Oxidoreductase, FAD-binding domain; Ferredoxin; Cytochrome b/b6, N-terminal; Oxidoreductase FAD/NAD(P)-binding.
  
 
 0.613
AEB86840.1
KEGG: ajs:Ajs_3977 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR.
  
     0.576
AEB82739.1
KEGG: ajs:Ajs_0229 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal.
     
 0.552
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.450
AEB83053.1
PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; KEGG: dac:Daci_1339 3-hydroxyacyl-CoA dehydrogenase NAD-binding.
  
 0.449
AEB83561.1
3-hydroxybutyryl-CoA epimerase; KEGG: rme:Rmet_5110 short chain enoyl-CoA hydratase.
  
 0.449
AEB85587.1
3-hydroxybutyryl-CoA epimerase; KEGG: ajs:Ajs_1684 short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.449
Your Current Organism:
Alicycliphilus denitrificans
NCBI taxonomy Id: 596154
Other names: A. denitrificans K601, Alicycliphilus denitrificans DSM 14773, Alicycliphilus denitrificans K601, Alicycliphilus denitrificans str. K601, Alicycliphilus denitrificans strain K601, Pseudomonas sp. K601, beta proteobacterium K601
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